Table 1

Summary of changes in gene expression in neurotrophins, growth factors, related receptors and structural proteins

NEUROTROPHINS AND RECEPTORS
Th1
M/M
Th2

M55293
trkB
-3.05*

-2.7*
E03082
NT3
-4.15***
-2.71***
-4.73****
AI030286
brain derived neurotrophic factor
-4.19*


AA944973
NGFR p75 precursor
-4.26**


S62933
trkC, alternatively spliced
-12.13***
-7.01***

AF023087
NGF-inducible IA

2.30***
2.25*
X67108
brain derived neurotrophic factor


2.11*
M86742
pre-pro NT4 protein


-2.62**
Y07559
NT 4/5


-2.63**
GROWTH/MATURATION FACTORS AND RECEPTORS
AI070577
insulin-like growth factor receptor 5
3.66**


Z14120
platelet-derived growth factor alpha (PDGF)
2.99****
3.20***
2.23***
M32167
vascular endothelial growth factor (VEGF)
2.39*

3.13**
D79215
fibroblast growth factor 10
2.17*
2.59***
2.44*
M81183
insulin-like growth factor 1 (IGF-1)
-2.02**


E0178
TGF-alpha
-2.09**


M90660
insulin receptor-related receptor alpha
-2.88**


X12748
epidermal growth factor precursor
-3.48****

-2.53***
U37101
granulocyte colony stimulating factor 3 (GCSF)

3.24****

D10106
prepropeptide PDGF A chain

2.73***
2.31***
D64085
fibroblast growth factor 5

2.18*

M18416
early growth response 1

2.03*

X07285
basic fibroblast growth factor

-2.06*

U66470
cell growth regulatory with EF-hand domain

-2.07*

AA818970
endothelin receptor type B


2.70****
AB008908
fibroblast growth factor 14


2.64*
AF014827
c-fos induced growth factor (VEGF D)


2.24**
S54008
fibroblast growth factor receptor 1


2.01***
U02320
neuregulin 1


-2.17**
AA875664
GCSF signaling molecule, mitochondria-associated


-2.24****
M17960
insulin-like growth factor II (somatomedin A)


-2.95**
AI137657
platelet-derived growth factor receptor alpha


-3.04*
HORMONES, RECEPTORS AND RELATED MOLECULES
U94321
growth hormone secretagogue receptor
3.09*
3.13***

M54987
corticotropin releasing hormone
2.17*

2.40*
U55836
parathyroid hormone receptor

-2.39**

U25803
luteinizing hormone, beta subunit
-2.57***
-2.14**
-2.18*
M34083
prolactin receptor
-2.86***
-2.69***

M63296
luteinizing hormone receptor
-2.92*


AA799498
natriuretic peptide precursor
-3.09**


M27408
follicle stimuating hormone beta
-3.21*

-3.30*
Z33403
luteinizing hormone receptor
-3.77**
-2.80*

Z83757
growth hormone receptor
-4.06*
-3.81*
-4.58*
Al235978
aldosterone receptor
-6.13


S49003
short isoform growth hormone receptor

2.78*

U25802
luteinizing hormone, beta subunit

-2.79***

L40030
placental growth factor

-3.33**

X01454
thyroid stimulating hormone, beta subunit

-3.55***

U41183
growth hormone releasing hormone

-5.09*

M19304
prolactin receptor

-5.81**

AA893618
glucocorticoid receptor


-2.64*
U92469
gonadotropin-releasing hormone receptor


-6.06**
AA946542
prolactin-like protein D


-6.09*
Al180410
prolactin-like protein C


-6.70***
CELL ADHESION AND EXTRACELLULAR MATRIX MOLECULES
S61868
syndecan 4
2.8*
3.5**

AA818894
proteoglycan core peptide
2.2*


U56859
perlecan
-3.29*


S61868
syndecan 4

2.9*

U16845
neurotrimin

2.76*
2.68*
U09401
tenascin c


3.92**
U15550
tenascin c


2.3*
Al071104
glypican 3


2.04**
MI5797
nidogen (entactin)


-2.02*
D50568
proteoglycan, bone marrow


-2.12*
AJ011811
claudin 7


-2.12*
U35371
BIG-2


-2.47**
X63143
syndecan 3 (neuroglycan)

-2.44**
-2.35**
AA8000059
syndecan 4


-2.9**
Al639167
biglycan (weakly similar to bone/cartilage p.g.)


-3.57**
CONNEXINS
M76532
connexin 37 (CXN-37)
2.76**


M59936
connexin-31 (CXN-31)
2.03**


AF022136
connexin 40 (CXN-40)

-2.82*

NEURONAL RELATED PROTEINS
M74223
VGF nerve growth factor inducible
3.04***
3.79***
2.25***
AF031430
syntaxin 7
2.09***


AF056704
synapsin 3
-2.18*

-4.27***
S96418
activin receptor IIA
-3.41*


U69702
activin receptor-like kinase 7
-3.62**


AA818677
neurofilament, heavy polypeptide
-4.16*


Y16563
bassoon
-4.88*


X17682
MAP 2

3.33**

U22952
neuroligin

2.49***

X66840
MAP 1A

-2.07*

X06655
synaptophysin

-2.13***

X06655
synaptophysin 2

-2.19****

M64488
synaptotagmin

-2.20****

U71924
synaptotagmin XII

-4.56*

AF041246
hypocretin (orexin)

-5.88*
-3.87***
L20820
syntaxin 3


-2.43***
X95286
semaphorin 3a


-2.94***
RETINAL PROTEINS
X52376
rds/peripherin

2.09***
2.15***
Z46957
rhodopsin

-4.64***
-5.14**
CANCER RELATED PROTEINS
AF036760
breast cancer 1
-2.28*
-2.52*
-2.05*
U68725
deleted in colorectal cancer (rat homolog)
-4.05**


U32081
deleted in malignant brain tumors 1

-6.02***

M32475
carcinoembryonic antigen


-4.58*
BONE-RELATED PROTEINS
Y07704
Best 5 protein
39.49****
7.02**

Y07704
Best 5 protein
31.46***
7.41*

AA892798
USAG (uterine-sensitized associated gene 1)


-2.10*

Values represent averages of fold changes from three separate experiments for each cytokine mixture compared to control. **** p < 0.01; *** p < 0.05; ** p < 0.10; * p < 0.20

Lisak et al. Journal of Neuroinflammation 2007 4:30   doi:10.1186/1742-2094-4-30